State MoSeq

Practical tutorials

  • Apply shMoSeq to an example dataset
  • Hyperparameters and model selection

Pedagogical tutorials

  • Standard HHMM
  • Data-efficient HHMM

Developer API

  • Efficient HHMM
  • Standard HHMM
  • Utility Functions
  • Visualization Functions
  • FAQ
State MoSeq
  • Overview: module code

All modules for which code is available

  • state_moseq.hhmm_efficient
  • state_moseq.hhmm_standard
  • state_moseq.util
  • state_moseq.viz

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